xchrom.pl.plot_logo

xchrom.pl.plot_logo(m: ndarray, ymin: float, ymax: float, ax: Axes, title: str | None = None)

Plot the relative importance of the given matrix per position.

Parameters:

• m (np.ndarray) – The matrix to plot the logo, shape (n_cells, seq_len, 4).

• ymin (float) – The minimum value of the y-axis.

• ymax (float) – The maximum value of the y-axis.

• ax (plt.Axes) – The axes to plot the logo.

• title (str) – The title of the plot.